Stochastic plot — stone_stochastic

Draw a stochastic plot showing all the different runs, with the mean, median, 5% and 95% quantiles shown.

Usage

stone_stochastic_graph(
  base,
  touchstone,
  disease,
  group,
  country,
  scenario,
  outcome,
  ages = NULL,
  by_cohort = FALSE,
  log = FALSE
)

Arguments

base: The folder in which the standardised stochastic files are found.
touchstone: The touchstone name (for the graph title)
disease: The disease, used for building the filename and graph title.
group: The modelling group, used in the filename and graph title.
country: The country to plot.
scenario: The scenario to plot.
outcome: The outcome to plot, for example deaths, cases, dalys or since 2023, yll.
ages: A vector of one or more ages to be selected and aggregated, or if left as NULL, then all ages are used and aggregated.
by_cohort: If TRUE, then age is subtracted from year to convert it to year of birth before aggregating.
log: If TRUE, then use a logged y-axis.